Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp1P56183 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp1P56183 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp1P56183 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp1P56183 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp1P56183 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rrp1P56183 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Rrp1P56183 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Rrp1P56183 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp1P56183 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.59■□□□□ 0.89
Rrp1P56183 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rrp1P56183 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rrp1P56183 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rrp1P56183 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rrp1P56183 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rrp1P56183 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rrp1P56183 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rrp1P56183 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rrp1P56183 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rrp1P56183 Gm13146-201ENSMUST00000118508 780 ntBASIC20.58■□□□□ 0.89
Rrp1P56183 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.58■□□□□ 0.89
Rrp1P56183 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.58■□□□□ 0.89
Rrp1P56183 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rrp1P56183 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rrp1P56183 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rrp1P56183 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rrp1P56183 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rrp1P56183 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp1P56183 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rrp1P56183 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.57■□□□□ 0.88
Rrp1P56183 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.57■□□□□ 0.88
Rrp1P56183 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp1P56183 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp1P56183 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.57■□□□□ 0.88
Rrp1P56183 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rrp1P56183 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rrp1P56183 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp1P56183 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp1P56183 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rrp1P56183 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rrp1P56183 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rrp1P56183 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.56■□□□□ 0.88
Rrp1P56183 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp1P56183 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rrp1P56183 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp1P56183 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
Rrp1P56183 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp1P56183 Gm43060-201ENSMUST00000200621 289 ntBASIC20.55■□□□□ 0.88
Rrp1P56183 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rrp1P56183 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp1P56183 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp1P56183 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.55■□□□□ 0.88
Rrp1P56183 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.54■□□□□ 0.88
Rrp1P56183 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rrp1P56183 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rrp1P56183 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Rrp1P56183 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.54■□□□□ 0.88
Rrp1P56183 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp1P56183 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.53■□□□□ 0.88
Rrp1P56183 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp1P56183 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp1P56183 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.52■□□□□ 0.88
Rrp1P56183 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp1P56183 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.52■□□□□ 0.88
Rrp1P56183 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp1P56183 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp1P56183 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.52■□□□□ 0.88
Rrp1P56183 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp1P56183 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rrp1P56183 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms