Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.37■□□□□ 0.69
NcanP55066 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.37■□□□□ 0.69
NcanP55066 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 AW822252-206ENSMUST00000208904 237 ntBASIC19.37■□□□□ 0.69
NcanP55066 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
NcanP55066 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NcanP55066 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NcanP55066 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
NcanP55066 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.36■□□□□ 0.69
NcanP55066 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NcanP55066 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NcanP55066 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.36■□□□□ 0.69
NcanP55066 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NcanP55066 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.36■□□□□ 0.69
NcanP55066 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NcanP55066 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NcanP55066 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NcanP55066 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NcanP55066 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.35■□□□□ 0.69
NcanP55066 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NcanP55066 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.35■□□□□ 0.69
NcanP55066 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.35■□□□□ 0.69
NcanP55066 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NcanP55066 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.35■□□□□ 0.69
NcanP55066 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NcanP55066 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.35■□□□□ 0.69
NcanP55066 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
NcanP55066 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NcanP55066 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NcanP55066 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NcanP55066 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NcanP55066 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NcanP55066 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NcanP55066 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NcanP55066 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NcanP55066 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.33■□□□□ 0.68
NcanP55066 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NcanP55066 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NcanP55066 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.33■□□□□ 0.68
NcanP55066 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NcanP55066 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.32■□□□□ 0.68
NcanP55066 Gm18958-201ENSMUST00000174258 762 ntBASIC19.32■□□□□ 0.68
NcanP55066 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.32■□□□□ 0.68
NcanP55066 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.32■□□□□ 0.68
NcanP55066 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NcanP55066 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.32■□□□□ 0.68
NcanP55066 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NcanP55066 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
NcanP55066 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NcanP55066 Gm29518-201ENSMUST00000190858 372 ntBASIC19.31■□□□□ 0.68
NcanP55066 Gm18669-201ENSMUST00000216049 778 ntBASIC19.31■□□□□ 0.68
NcanP55066 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NcanP55066 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NcanP55066 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NcanP55066 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NcanP55066 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms