Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox1P53783 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox1P53783 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sox1P53783 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Mir3081-201ENSMUST00000175305 84 ntBASIC18.69■□□□□ 0.58
Sox1P53783 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.69■□□□□ 0.58
Sox1P53783 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox1P53783 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.69■□□□□ 0.58
Sox1P53783 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox1P53783 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox1P53783 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox1P53783 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.68■□□□□ 0.58
Sox1P53783 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Sox1P53783 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox1P53783 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox1P53783 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.68■□□□□ 0.58
Sox1P53783 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.67■□□□□ 0.58
Sox1P53783 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sox1P53783 Gm34391-201ENSMUST00000203706 907 ntBASIC18.67■□□□□ 0.58
Sox1P53783 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox1P53783 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox1P53783 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sox1P53783 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sox1P53783 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox1P53783 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Sox1P53783 Gm21559-201ENSMUST00000220638 855 ntBASIC18.66■□□□□ 0.58
Sox1P53783 Gm8587-201ENSMUST00000076538 843 ntBASIC18.66■□□□□ 0.58
Sox1P53783 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox1P53783 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox1P53783 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox1P53783 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.65■□□□□ 0.58
Sox1P53783 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox1P53783 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sox1P53783 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox1P53783 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.65■□□□□ 0.58
Sox1P53783 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox1P53783 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox1P53783 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox1P53783 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox1P53783 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox1P53783 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Sox1P53783 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Sox1P53783 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Sox1P53783 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Sox1P53783 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox1P53783 Gm27525-201ENSMUST00000184465 107 ntBASIC18.64■□□□□ 0.57
Sox1P53783 Gm28659-201ENSMUST00000188013 759 ntBASIC18.64■□□□□ 0.57
Sox1P53783 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sox1P53783 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox1P53783 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox1P53783 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox1P53783 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox1P53783 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.63■□□□□ 0.57
Sox1P53783 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox1P53783 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox1P53783 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms