Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.67■□□□□ 0.42
Lbx1P52955 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Gm27357-201ENSMUST00000183754 135 ntBASIC17.67■□□□□ 0.42
Lbx1P52955 Gm10576-201ENSMUST00000191927 825 ntBASIC17.67■□□□□ 0.42
Lbx1P52955 Gm38285-201ENSMUST00000192928 922 ntBASIC17.67■□□□□ 0.42
Lbx1P52955 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.67■□□□□ 0.42
Lbx1P52955 Gm21559-201ENSMUST00000220638 855 ntBASIC17.67■□□□□ 0.42
Lbx1P52955 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Lbx1P52955 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Gm8587-201ENSMUST00000076538 843 ntBASIC17.67■□□□□ 0.42
Lbx1P52955 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.67■□□□□ 0.42
Lbx1P52955 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lbx1P52955 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lbx1P52955 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lbx1P52955 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lbx1P52955 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lbx1P52955 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Gm27389-201ENSMUST00000183622 195 ntBASIC17.66■□□□□ 0.42
Lbx1P52955 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.66■□□□□ 0.42
Lbx1P52955 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lbx1P52955 Birc2-201ENSMUST00000054878 378 ntBASIC17.66■□□□□ 0.42
Lbx1P52955 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.66■□□□□ 0.42
Lbx1P52955 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lbx1P52955 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lbx1P52955 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.65■□□□□ 0.42
Lbx1P52955 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Lbx1P52955 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lbx1P52955 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lbx1P52955 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lbx1P52955 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lbx1P52955 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lbx1P52955 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lbx1P52955 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.64■□□□□ 0.42
Lbx1P52955 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lbx1P52955 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lbx1P52955 Zfp783-201ENSMUST00000095946 670 ntBASIC17.64■□□□□ 0.41
Lbx1P52955 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.64■□□□□ 0.41
Lbx1P52955 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Lbx1P52955 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lbx1P52955 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.63■□□□□ 0.41
Lbx1P52955 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lbx1P52955 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.63■□□□□ 0.41
Lbx1P52955 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lbx1P52955 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lbx1P52955 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lbx1P52955 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lbx1P52955 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lbx1P52955 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lbx1P52955 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lbx1P52955 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.61■□□□□ 0.41
Lbx1P52955 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.61■□□□□ 0.41
Lbx1P52955 Gm7791-201ENSMUST00000219066 539 ntBASIC17.61■□□□□ 0.41
Lbx1P52955 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.61■□□□□ 0.41
Lbx1P52955 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms