Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.34■□□□□ 0.85
Nek1P51954 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nek1P51954 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nek1P51954 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nek1P51954 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nek1P51954 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nek1P51954 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nek1P51954 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.33■□□□□ 0.85
Nek1P51954 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nek1P51954 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nek1P51954 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Nek1P51954 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.33■□□□□ 0.84
Nek1P51954 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nek1P51954 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
Nek1P51954 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nek1P51954 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nek1P51954 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Gm13146-201ENSMUST00000118508 780 ntBASIC20.32■□□□□ 0.84
Nek1P51954 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.32■□□□□ 0.84
Nek1P51954 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Nek1P51954 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nek1P51954 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nek1P51954 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nek1P51954 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nek1P51954 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.31■□□□□ 0.84
Nek1P51954 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.31■□□□□ 0.84
Nek1P51954 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nek1P51954 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.31■□□□□ 0.84
Nek1P51954 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nek1P51954 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Nek1P51954 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 Gm7514-201ENSMUST00000209475 934 ntBASIC20.3■□□□□ 0.84
Nek1P51954 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nek1P51954 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nek1P51954 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.29■□□□□ 0.84
Nek1P51954 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.29■□□□□ 0.84
Nek1P51954 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.29■□□□□ 0.84
Nek1P51954 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.29■□□□□ 0.84
Nek1P51954 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nek1P51954 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nek1P51954 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nek1P51954 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.29■□□□□ 0.84
Nek1P51954 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nek1P51954 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.28■□□□□ 0.84
Nek1P51954 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nek1P51954 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.28■□□□□ 0.84
Nek1P51954 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nek1P51954 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nek1P51954 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.28■□□□□ 0.84
Nek1P51954 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek1P51954 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek1P51954 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek1P51954 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek1P51954 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nek1P51954 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Nek1P51954 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nek1P51954 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nek1P51954 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nek1P51954 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.26■□□□□ 0.83
Nek1P51954 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.26■□□□□ 0.83
Nek1P51954 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nek1P51954 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Nek1P51954 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.26■□□□□ 0.83
Nek1P51954 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms