Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox2P48432 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Sox2P48432 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.12■□□□□ 0.33
Sox2P48432 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.12■□□□□ 0.33
Sox2P48432 Gm27801-201ENSMUST00000184174 223 ntBASIC17.12■□□□□ 0.33
Sox2P48432 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sox2P48432 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox2P48432 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
Sox2P48432 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox2P48432 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox2P48432 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.1■□□□□ 0.33
Sox2P48432 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox2P48432 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox2P48432 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.1■□□□□ 0.33
Sox2P48432 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox2P48432 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.1■□□□□ 0.33
Sox2P48432 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sox2P48432 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox2P48432 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox2P48432 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sox2P48432 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox2P48432 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Sox2P48432 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.09■□□□□ 0.33
Sox2P48432 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox2P48432 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sox2P48432 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.09■□□□□ 0.33
Sox2P48432 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox2P48432 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox2P48432 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox2P48432 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.09■□□□□ 0.33
Sox2P48432 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox2P48432 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.08■□□□□ 0.33
Sox2P48432 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox2P48432 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Sox2P48432 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Sox2P48432 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.08■□□□□ 0.32
Sox2P48432 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sox2P48432 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox2P48432 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.07■□□□□ 0.32
Sox2P48432 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sox2P48432 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sox2P48432 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox2P48432 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox2P48432 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox2P48432 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox2P48432 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox2P48432 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms