Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.49■□□□□ 0.39
Sox18P43680 Timm23-208ENSMUST00000226683 750 ntBASIC17.49■□□□□ 0.39
Sox18P43680 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox18P43680 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox18P43680 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox18P43680 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox18P43680 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox18P43680 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox18P43680 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox18P43680 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sox18P43680 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sox18P43680 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox18P43680 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox18P43680 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox18P43680 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Sox18P43680 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sox18P43680 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox18P43680 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox18P43680 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox18P43680 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox18P43680 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox18P43680 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.46■□□□□ 0.39
Sox18P43680 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox18P43680 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox18P43680 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox18P43680 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox18P43680 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sox18P43680 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Notumos-201ENSMUST00000151998 2659 ntBASIC17.45■□□□□ 0.38
Sox18P43680 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Ank2-226ENSMUST00000189368 339 ntBASIC17.45■□□□□ 0.38
Sox18P43680 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.45■□□□□ 0.38
Sox18P43680 Gm18959-201ENSMUST00000208954 655 ntBASIC17.45■□□□□ 0.38
Sox18P43680 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.45■□□□□ 0.38
Sox18P43680 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox18P43680 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox18P43680 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox18P43680 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.44■□□□□ 0.38
Sox18P43680 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Sox18P43680 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.44■□□□□ 0.38
Sox18P43680 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox18P43680 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox18P43680 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Sox18P43680 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox18P43680 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox18P43680 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox18P43680 Gm14859-201ENSMUST00000117752 357 ntBASIC17.43■□□□□ 0.38
Sox18P43680 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.43■□□□□ 0.38
Sox18P43680 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox18P43680 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox18P43680 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox18P43680 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sox18P43680 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox18P43680 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox18P43680 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox18P43680 Golph3-202ENSMUST00000226517 2359 ntBASIC17.42■□□□□ 0.38
Sox18P43680 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sox18P43680 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.42■□□□□ 0.38
Sox18P43680 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.42■□□□□ 0.38
Sox18P43680 Gm18025-201ENSMUST00000221733 862 ntBASIC17.42■□□□□ 0.38
Sox18P43680 Gm18032-201ENSMUST00000222541 538 ntBASIC17.42■□□□□ 0.38
Sox18P43680 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox18P43680 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox18P43680 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.42■□□□□ 0.38
Sox18P43680 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox18P43680 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox18P43680 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox18P43680 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms