Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh2P43247 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
Msh2P43247 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh2P43247 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh2P43247 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Msh2P43247 Gm42642-201ENSMUST00000200683 355 ntBASIC18.79■□□□□ 0.6
Msh2P43247 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh2P43247 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Msh2P43247 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh2P43247 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh2P43247 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh2P43247 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Msh2P43247 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Msh2P43247 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Msh2P43247 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.78■□□□□ 0.6
Msh2P43247 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.78■□□□□ 0.6
Msh2P43247 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Msh2P43247 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh2P43247 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Msh2P43247 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Gm7860-201ENSMUST00000121190 879 ntBASIC18.77■□□□□ 0.6
Msh2P43247 Gm38205-201ENSMUST00000192243 258 ntBASIC18.77■□□□□ 0.6
Msh2P43247 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.77■□□□□ 0.6
Msh2P43247 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Msh2P43247 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Msh2P43247 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Msh2P43247 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh2P43247 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.77■□□□□ 0.59
Msh2P43247 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msh2P43247 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msh2P43247 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msh2P43247 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Gm13234-201ENSMUST00000120010 747 ntBASIC18.76■□□□□ 0.59
Msh2P43247 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.76■□□□□ 0.59
Msh2P43247 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Msh2P43247 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh2P43247 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.76■□□□□ 0.59
Msh2P43247 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh2P43247 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh2P43247 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.75■□□□□ 0.59
Msh2P43247 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.75■□□□□ 0.59
Msh2P43247 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msh2P43247 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.75■□□□□ 0.59
Msh2P43247 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh2P43247 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Msh2P43247 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Msh2P43247 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Msh2P43247 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Msh2P43247 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.74■□□□□ 0.59
Msh2P43247 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.74■□□□□ 0.59
Msh2P43247 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.74■□□□□ 0.59
Msh2P43247 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Gm10033-202ENSMUST00000211874 928 ntBASIC18.74■□□□□ 0.59
Msh2P43247 Gm18671-201ENSMUST00000214826 683 ntBASIC18.74■□□□□ 0.59
Msh2P43247 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.74■□□□□ 0.59
Msh2P43247 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Msh2P43247 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh2P43247 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Msh2P43247 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Msh2P43247 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh2P43247 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.73■□□□□ 0.59
Msh2P43247 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Msh2P43247 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms