Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf6P43028 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf6P43028 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf6P43028 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gdf6P43028 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf6P43028 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf6P43028 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.23■□□□□ 0.67
Gdf6P43028 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gdf6P43028 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf6P43028 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.22■□□□□ 0.67
Gdf6P43028 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.22■□□□□ 0.67
Gdf6P43028 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Gdf6P43028 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf6P43028 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.22■□□□□ 0.67
Gdf6P43028 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gdf6P43028 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gdf6P43028 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.21■□□□□ 0.67
Gdf6P43028 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.21■□□□□ 0.67
Gdf6P43028 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.21■□□□□ 0.67
Gdf6P43028 Gm10138-203ENSMUST00000206952 366 ntBASIC19.21■□□□□ 0.67
Gdf6P43028 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf6P43028 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.21■□□□□ 0.67
Gdf6P43028 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gdf6P43028 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gdf6P43028 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.2■□□□□ 0.66
Gdf6P43028 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.2■□□□□ 0.66
Gdf6P43028 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf6P43028 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.19■□□□□ 0.66
Gdf6P43028 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Gdf6P43028 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.19■□□□□ 0.66
Gdf6P43028 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Mir1199-201ENSMUST00000117015 119 ntBASIC19.19■□□□□ 0.66
Gdf6P43028 Gm715-201ENSMUST00000117865 831 ntBASIC19.19■□□□□ 0.66
Gdf6P43028 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.19■□□□□ 0.66
Gdf6P43028 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.19■□□□□ 0.66
Gdf6P43028 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.19■□□□□ 0.66
Gdf6P43028 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf6P43028 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf6P43028 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.18■□□□□ 0.66
Gdf6P43028 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.18■□□□□ 0.66
Gdf6P43028 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf6P43028 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf6P43028 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf6P43028 Gm15375-201ENSMUST00000119510 849 ntBASIC19.18■□□□□ 0.66
Gdf6P43028 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gdf6P43028 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf6P43028 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf6P43028 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.17■□□□□ 0.66
Gdf6P43028 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.17■□□□□ 0.66
Gdf6P43028 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.17■□□□□ 0.66
Gdf6P43028 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.17■□□□□ 0.66
Gdf6P43028 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gdf6P43028 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gdf6P43028 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms