Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.46■□□□□ 0.39
Tnfsf9P41274 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.46■□□□□ 0.39
Tnfsf9P41274 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf9P41274 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Tnfsf9P41274 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf9P41274 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Gm13158-201ENSMUST00000122007 736 ntBASIC17.44■□□□□ 0.38
Tnfsf9P41274 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf9P41274 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfsf9P41274 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfsf9P41274 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.43■□□□□ 0.38
Tnfsf9P41274 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf9P41274 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.42■□□□□ 0.38
Tnfsf9P41274 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsf9P41274 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.42■□□□□ 0.38
Tnfsf9P41274 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Gm11927-201ENSMUST00000118472 759 ntBASIC17.41■□□□□ 0.38
Tnfsf9P41274 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.41■□□□□ 0.38
Tnfsf9P41274 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsf9P41274 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms