Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Timp3P39876 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
Timp3P39876 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Timp3P39876 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.92□□□□□ -0.02
Timp3P39876 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.91□□□□□ -0.02
Timp3P39876 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.91□□□□□ -0.02
Timp3P39876 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.91□□□□□ -0.02
Timp3P39876 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Timp3P39876 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Timp3P39876 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.9□□□□□ -0.02
Timp3P39876 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.9□□□□□ -0.02
Timp3P39876 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.9□□□□□ -0.02
Timp3P39876 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Timp3P39876 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Timp3P39876 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Timp3P39876 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Timp3P39876 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.89□□□□□ -0.03
Timp3P39876 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Timp3P39876 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.89□□□□□ -0.03
Timp3P39876 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Timp3P39876 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Timp3P39876 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.88□□□□□ -0.03
Timp3P39876 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Timp3P39876 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.88□□□□□ -0.03
Timp3P39876 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.88□□□□□ -0.03
Timp3P39876 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Timp3P39876 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Timp3P39876 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.88□□□□□ -0.03
Timp3P39876 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.88□□□□□ -0.03
Timp3P39876 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Timp3P39876 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.88□□□□□ -0.03
Timp3P39876 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.87□□□□□ -0.03
Timp3P39876 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.87□□□□□ -0.03
Timp3P39876 Gm13168-201ENSMUST00000121771 632 ntBASIC14.87□□□□□ -0.03
Timp3P39876 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.87□□□□□ -0.03
Timp3P39876 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Timp3P39876 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Timp3P39876 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms