Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cdh4P39038 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Cdh4P39038 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdh4P39038 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdh4P39038 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Cdh4P39038 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Gm12441-201ENSMUST00000121806 588 ntBASIC17.45■□□□□ 0.38
Cdh4P39038 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.45■□□□□ 0.38
Cdh4P39038 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.45■□□□□ 0.38
Cdh4P39038 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cdh4P39038 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh4P39038 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh4P39038 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.44■□□□□ 0.38
Cdh4P39038 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdh4P39038 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.44■□□□□ 0.38
Cdh4P39038 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.44■□□□□ 0.38
Cdh4P39038 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.44■□□□□ 0.38
Cdh4P39038 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cdh4P39038 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdh4P39038 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh4P39038 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cdh4P39038 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.43■□□□□ 0.38
Cdh4P39038 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cdh4P39038 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cdh4P39038 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.43■□□□□ 0.38
Cdh4P39038 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cdh4P39038 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh4P39038 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.42■□□□□ 0.38
Cdh4P39038 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cdh4P39038 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cdh4P39038 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.42■□□□□ 0.38
Cdh4P39038 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.42■□□□□ 0.38
Cdh4P39038 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Cdh4P39038 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.42■□□□□ 0.38
Cdh4P39038 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh4P39038 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Cdh4P39038 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cdh4P39038 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.41■□□□□ 0.38
Cdh4P39038 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.41■□□□□ 0.38
Cdh4P39038 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.41■□□□□ 0.38
Cdh4P39038 Gm22325-201ENSMUST00000158904 308 ntBASIC17.41■□□□□ 0.38
Cdh4P39038 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.41■□□□□ 0.38
Cdh4P39038 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.41■□□□□ 0.38
Cdh4P39038 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cdh4P39038 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdh4P39038 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.41■□□□□ 0.38
Cdh4P39038 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdh4P39038 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms