Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nedd8P29595 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.93■□□□□ 0.3
Nedd8P29595 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nedd8P29595 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nedd8P29595 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.93■□□□□ 0.3
Nedd8P29595 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.93■□□□□ 0.3
Nedd8P29595 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nedd8P29595 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nedd8P29595 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.92■□□□□ 0.3
Nedd8P29595 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nedd8P29595 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.92■□□□□ 0.3
Nedd8P29595 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.92■□□□□ 0.3
Nedd8P29595 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Gm9870-201ENSMUST00000063874 645 ntBASIC16.92■□□□□ 0.3
Nedd8P29595 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nedd8P29595 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nedd8P29595 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.91■□□□□ 0.3
Nedd8P29595 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nedd8P29595 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nedd8P29595 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Nedd8P29595 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nedd8P29595 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nedd8P29595 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nedd8P29595 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nedd8P29595 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Nedd8P29595 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.89■□□□□ 0.29
Nedd8P29595 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.89■□□□□ 0.29
Nedd8P29595 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nedd8P29595 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nedd8P29595 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nedd8P29595 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.88■□□□□ 0.29
Nedd8P29595 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nedd8P29595 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms