Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
Nckap1P28660 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1P28660 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1P28660 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1P28660 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.15■□□□□ 0.5
Nckap1P28660 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1P28660 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1P28660 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.14■□□□□ 0.49
Nckap1P28660 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nckap1P28660 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1P28660 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Nckap1P28660 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Nckap1P28660 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.13■□□□□ 0.49
Nckap1P28660 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.13■□□□□ 0.49
Nckap1P28660 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.13■□□□□ 0.49
Nckap1P28660 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.13■□□□□ 0.49
Nckap1P28660 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nckap1P28660 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1P28660 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Nckap1P28660 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.12■□□□□ 0.49
Nckap1P28660 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.12■□□□□ 0.49
Nckap1P28660 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Zfp783-201ENSMUST00000095946 670 ntBASIC18.12■□□□□ 0.49
Nckap1P28660 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nckap1P28660 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nckap1P28660 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.11■□□□□ 0.49
Nckap1P28660 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Mir1199-201ENSMUST00000117015 119 ntBASIC18.11■□□□□ 0.49
Nckap1P28660 Gm715-201ENSMUST00000117865 831 ntBASIC18.11■□□□□ 0.49
Nckap1P28660 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.11■□□□□ 0.49
Nckap1P28660 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.11■□□□□ 0.49
Nckap1P28660 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nckap1P28660 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.11■□□□□ 0.49
Nckap1P28660 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nckap1P28660 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nckap1P28660 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms