Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Gja4P28235 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gja4P28235 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.31■□□□□ 0.52
Gja4P28235 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gja4P28235 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Gja4P28235 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gja4P28235 Mir6349-201ENSMUST00000184059 97 ntBASIC18.3■□□□□ 0.52
Gja4P28235 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Gja4P28235 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gja4P28235 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gja4P28235 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gja4P28235 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.29■□□□□ 0.52
Gja4P28235 Gm10231-201ENSMUST00000181584 441 ntBASIC18.29■□□□□ 0.52
Gja4P28235 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gja4P28235 Gm10175-202ENSMUST00000208752 441 ntBASIC18.29■□□□□ 0.52
Gja4P28235 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.29■□□□□ 0.52
Gja4P28235 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.29■□□□□ 0.52
Gja4P28235 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gja4P28235 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gja4P28235 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.29■□□□□ 0.52
Gja4P28235 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gja4P28235 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gja4P28235 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gja4P28235 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gja4P28235 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gja4P28235 Gm12382-201ENSMUST00000122005 922 ntBASIC18.28■□□□□ 0.52
Gja4P28235 Gm30025-201ENSMUST00000218555 728 ntBASIC18.28■□□□□ 0.52
Gja4P28235 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gja4P28235 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gja4P28235 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gja4P28235 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gja4P28235 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gja4P28235 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.28■□□□□ 0.52
Gja4P28235 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gja4P28235 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.27■□□□□ 0.52
Gja4P28235 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gja4P28235 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.27■□□□□ 0.52
Gja4P28235 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gja4P28235 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gja4P28235 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gja4P28235 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gja4P28235 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gja4P28235 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.27■□□□□ 0.52
Gja4P28235 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.27■□□□□ 0.51
Gja4P28235 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Gja4P28235 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gja4P28235 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.26■□□□□ 0.51
Gja4P28235 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gja4P28235 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.26■□□□□ 0.51
Gja4P28235 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gja4P28235 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Gja4P28235 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gja4P28235 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.25■□□□□ 0.51
Gja4P28235 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gja4P28235 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.25■□□□□ 0.51
Gja4P28235 Odf3b-204ENSMUST00000227834 930 ntBASIC18.25■□□□□ 0.51
Gja4P28235 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gja4P28235 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.24■□□□□ 0.51
Gja4P28235 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gja4P28235 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gja4P28235 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gja4P28235 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gja4P28235 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gja4P28235 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.24■□□□□ 0.51
Gja4P28235 Timm23-208ENSMUST00000226683 750 ntBASIC18.24■□□□□ 0.51
Gja4P28235 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gja4P28235 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms