Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.73■□□□□ 0.75
Irf8P23611 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf8P23611 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf8P23611 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf8P23611 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf8P23611 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf8P23611 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Irf8P23611 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf8P23611 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf8P23611 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf8P23611 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Irf8P23611 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.72■□□□□ 0.75
Irf8P23611 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.72■□□□□ 0.75
Irf8P23611 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Irf8P23611 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf8P23611 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Irf8P23611 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf8P23611 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.72■□□□□ 0.75
Irf8P23611 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Irf8P23611 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.71■□□□□ 0.75
Irf8P23611 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Irf8P23611 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.71■□□□□ 0.75
Irf8P23611 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.71■□□□□ 0.75
Irf8P23611 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Irf8P23611 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.71■□□□□ 0.75
Irf8P23611 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf8P23611 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Irf8P23611 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.7■□□□□ 0.74
Irf8P23611 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Irf8P23611 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Irf8P23611 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.7■□□□□ 0.74
Irf8P23611 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Irf8P23611 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf8P23611 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf8P23611 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf8P23611 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf8P23611 Gm12441-201ENSMUST00000121806 588 ntBASIC19.69■□□□□ 0.74
Irf8P23611 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.69■□□□□ 0.74
Irf8P23611 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Irf8P23611 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf8P23611 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Irf8P23611 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Irf8P23611 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Flg-201ENSMUST00000050758 1488 ntBASIC19.68■□□□□ 0.74
Irf8P23611 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Irf8P23611 Gm38285-201ENSMUST00000192928 922 ntBASIC19.68■□□□□ 0.74
Irf8P23611 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.68■□□□□ 0.74
Irf8P23611 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Irf8P23611 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf8P23611 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf8P23611 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf8P23611 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf8P23611 Zfp783-201ENSMUST00000095946 670 ntBASIC19.67■□□□□ 0.74
Irf8P23611 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf8P23611 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf8P23611 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.67■□□□□ 0.74
Irf8P23611 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.67■□□□□ 0.74
Irf8P23611 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.67■□□□□ 0.74
Irf8P23611 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Irf8P23611 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Irf8P23611 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.66■□□□□ 0.74
Irf8P23611 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Irf8P23611 Gm2559-201ENSMUST00000201323 363 ntBASIC19.66■□□□□ 0.74
Irf8P23611 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.66■□□□□ 0.74
Irf8P23611 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf8P23611 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms