Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.84■□□□□ 0.77
Pde6bP23440 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pde6bP23440 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6bP23440 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6bP23440 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6bP23440 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pde6bP23440 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pde6bP23440 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6bP23440 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Pde6bP23440 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6bP23440 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pde6bP23440 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6bP23440 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6bP23440 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6bP23440 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6bP23440 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6bP23440 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6bP23440 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.82■□□□□ 0.76
Pde6bP23440 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Pde6bP23440 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6bP23440 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6bP23440 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6bP23440 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Pde6bP23440 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.81■□□□□ 0.76
Pde6bP23440 Mir1199-201ENSMUST00000117015 119 ntBASIC19.81■□□□□ 0.76
Pde6bP23440 Gm11927-201ENSMUST00000118472 759 ntBASIC19.81■□□□□ 0.76
Pde6bP23440 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.81■□□□□ 0.76
Pde6bP23440 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6bP23440 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pde6bP23440 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.81■□□□□ 0.76
Pde6bP23440 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6bP23440 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Pde6bP23440 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6bP23440 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6bP23440 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Gm13836-201ENSMUST00000121159 501 ntBASIC19.8■□□□□ 0.76
Pde6bP23440 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6bP23440 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.79■□□□□ 0.76
Pde6bP23440 Gm7977-201ENSMUST00000193787 748 ntBASIC19.79■□□□□ 0.76
Pde6bP23440 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.79■□□□□ 0.76
Pde6bP23440 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Pde6bP23440 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.79■□□□□ 0.76
Pde6bP23440 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.79■□□□□ 0.76
Pde6bP23440 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6bP23440 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pde6bP23440 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Pde6bP23440 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.78■□□□□ 0.76
Pde6bP23440 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.78■□□□□ 0.76
Pde6bP23440 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.78■□□□□ 0.76
Pde6bP23440 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pde6bP23440 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6bP23440 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6bP23440 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.77■□□□□ 0.76
Pde6bP23440 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6bP23440 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.77■□□□□ 0.76
Pde6bP23440 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6bP23440 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.77■□□□□ 0.76
Pde6bP23440 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.77■□□□□ 0.76
Pde6bP23440 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6bP23440 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pde6bP23440 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pde6bP23440 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms