Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.91■□□□□ 0.3
Clk1P22518 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.91■□□□□ 0.3
Clk1P22518 Gm7514-201ENSMUST00000209475 934 ntBASIC16.91■□□□□ 0.3
Clk1P22518 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.91■□□□□ 0.3
Clk1P22518 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk1P22518 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clk1P22518 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Clk1P22518 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Clk1P22518 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.9■□□□□ 0.3
Clk1P22518 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clk1P22518 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clk1P22518 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clk1P22518 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clk1P22518 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clk1P22518 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clk1P22518 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.89■□□□□ 0.29
Clk1P22518 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.89■□□□□ 0.29
Clk1P22518 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.89■□□□□ 0.29
Clk1P22518 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clk1P22518 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk1P22518 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.89■□□□□ 0.29
Clk1P22518 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clk1P22518 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clk1P22518 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk1P22518 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.88■□□□□ 0.29
Clk1P22518 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk1P22518 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk1P22518 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Clk1P22518 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.87■□□□□ 0.29
Clk1P22518 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.87■□□□□ 0.29
Clk1P22518 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Clk1P22518 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.87■□□□□ 0.29
Clk1P22518 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clk1P22518 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Clk1P22518 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk1P22518 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk1P22518 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Clk1P22518 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.86■□□□□ 0.29
Clk1P22518 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Clk1P22518 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.86■□□□□ 0.29
Clk1P22518 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.86■□□□□ 0.29
Clk1P22518 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clk1P22518 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms