Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp42P22227 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Zfp42P22227 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Zfp42P22227 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp42P22227 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp42P22227 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Zfp42P22227 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Zfp42P22227 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Zfp42P22227 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp42P22227 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Zfp42P22227 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Zfp42P22227 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Zfp42P22227 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.15■□□□□ 0.66
Zfp42P22227 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.15■□□□□ 0.66
Zfp42P22227 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Zfp42P22227 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Zfp42P22227 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Zfp42P22227 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp42P22227 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.15■□□□□ 0.66
Zfp42P22227 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Zfp42P22227 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zfp42P22227 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.14■□□□□ 0.66
Zfp42P22227 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Zfp42P22227 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zfp42P22227 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.14■□□□□ 0.65
Zfp42P22227 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Zfp42P22227 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.14■□□□□ 0.65
Zfp42P22227 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp42P22227 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.13■□□□□ 0.65
Zfp42P22227 Gm9988-201ENSMUST00000069786 435 ntBASIC19.13■□□□□ 0.65
Zfp42P22227 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.13■□□□□ 0.65
Zfp42P22227 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.13■□□□□ 0.65
Zfp42P22227 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.13■□□□□ 0.65
Zfp42P22227 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zfp42P22227 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Zfp42P22227 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Zfp42P22227 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.12■□□□□ 0.65
Zfp42P22227 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zfp42P22227 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.11■□□□□ 0.65
Zfp42P22227 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.11■□□□□ 0.65
Zfp42P22227 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Zfp42P22227 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zfp42P22227 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.11■□□□□ 0.65
Zfp42P22227 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms