Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BdnfP21237 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.44■□□□□ 0.38
BdnfP21237 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.44■□□□□ 0.38
BdnfP21237 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.44■□□□□ 0.38
BdnfP21237 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BdnfP21237 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
BdnfP21237 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BdnfP21237 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
BdnfP21237 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.43■□□□□ 0.38
BdnfP21237 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.43■□□□□ 0.38
BdnfP21237 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
BdnfP21237 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.43■□□□□ 0.38
BdnfP21237 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BdnfP21237 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.43■□□□□ 0.38
BdnfP21237 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.43■□□□□ 0.38
BdnfP21237 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.43■□□□□ 0.38
BdnfP21237 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BdnfP21237 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BdnfP21237 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BdnfP21237 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BdnfP21237 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.42■□□□□ 0.38
BdnfP21237 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
BdnfP21237 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BdnfP21237 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BdnfP21237 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BdnfP21237 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BdnfP21237 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.41■□□□□ 0.38
BdnfP21237 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.41■□□□□ 0.38
BdnfP21237 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.41■□□□□ 0.38
BdnfP21237 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.41■□□□□ 0.38
BdnfP21237 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BdnfP21237 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BdnfP21237 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BdnfP21237 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BdnfP21237 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.4■□□□□ 0.38
BdnfP21237 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms