Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Nespas-201ENSMUST00000143738 1083 ntBASIC17.15■□□□□ 0.34
TP20293 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TP20293 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.15■□□□□ 0.34
TP20293 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TP20293 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TP20293 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TP20293 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TP20293 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TP20293 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.14■□□□□ 0.33
TP20293 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TP20293 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.14■□□□□ 0.33
TP20293 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TP20293 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TP20293 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TP20293 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.13■□□□□ 0.33
TP20293 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TP20293 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TP20293 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TP20293 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.12■□□□□ 0.33
TP20293 Gm37179-201ENSMUST00000194862 823 ntBASIC17.12■□□□□ 0.33
TP20293 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.12■□□□□ 0.33
TP20293 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.12■□□□□ 0.33
TP20293 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TP20293 BC021767-201ENSMUST00000126387 1716 ntBASIC17.12■□□□□ 0.33
TP20293 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TP20293 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.11■□□□□ 0.33
TP20293 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TP20293 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.11■□□□□ 0.33
TP20293 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.11■□□□□ 0.33
TP20293 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TP20293 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.1■□□□□ 0.33
TP20293 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TP20293 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TP20293 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.1■□□□□ 0.33
TP20293 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.1■□□□□ 0.33
TP20293 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.1■□□□□ 0.33
TP20293 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.1■□□□□ 0.33
TP20293 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.1■□□□□ 0.33
TP20293 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TP20293 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TP20293 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms