Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sdc1P18828 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sdc1P18828 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sdc1P18828 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sdc1P18828 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sdc1P18828 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sdc1P18828 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sdc1P18828 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.02■□□□□ -0
Sdc1P18828 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.02□□□□□ -0.01
Sdc1P18828 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sdc1P18828 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.02□□□□□ -0.01
Sdc1P18828 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.01□□□□□ -0.01
Sdc1P18828 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.01□□□□□ -0.01
Sdc1P18828 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.01□□□□□ -0.01
Sdc1P18828 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sdc1P18828 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sdc1P18828 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sdc1P18828 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sdc1P18828 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sdc1P18828 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sdc1P18828 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Sdc1P18828 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15□□□□□ -0.01
Sdc1P18828 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sdc1P18828 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sdc1P18828 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.99□□□□□ -0.01
Sdc1P18828 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sdc1P18828 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sdc1P18828 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.99□□□□□ -0.01
Sdc1P18828 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.99□□□□□ -0.01
Sdc1P18828 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.99□□□□□ -0.01
Sdc1P18828 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.99□□□□□ -0.01
Sdc1P18828 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sdc1P18828 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sdc1P18828 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.98□□□□□ -0.01
Sdc1P18828 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sdc1P18828 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Sdc1P18828 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sdc1P18828 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sdc1P18828 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sdc1P18828 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sdc1P18828 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sdc1P18828 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sdc1P18828 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sdc1P18828 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms