Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cd44P15379 Gm9988-201ENSMUST00000069786 435 ntBASIC19.2■□□□□ 0.66
Cd44P15379 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cd44P15379 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd44P15379 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Cd44P15379 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.19■□□□□ 0.66
Cd44P15379 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.19■□□□□ 0.66
Cd44P15379 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Cd44P15379 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd44P15379 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd44P15379 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.18■□□□□ 0.66
Cd44P15379 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cd44P15379 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd44P15379 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.18■□□□□ 0.66
Cd44P15379 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cd44P15379 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cd44P15379 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cd44P15379 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd44P15379 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.16■□□□□ 0.66
Cd44P15379 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.16■□□□□ 0.66
Cd44P15379 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cd44P15379 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cd44P15379 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.16■□□□□ 0.66
Cd44P15379 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.16■□□□□ 0.66
Cd44P15379 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd44P15379 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cd44P15379 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd44P15379 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd44P15379 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.15■□□□□ 0.66
Cd44P15379 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd44P15379 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd44P15379 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd44P15379 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cd44P15379 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.15■□□□□ 0.66
Cd44P15379 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cd44P15379 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cd44P15379 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cd44P15379 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd44P15379 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cd44P15379 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cd44P15379 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd44P15379 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Cd44P15379 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd44P15379 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cd44P15379 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd44P15379 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.14■□□□□ 0.65
Cd44P15379 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.14■□□□□ 0.65
Cd44P15379 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.13■□□□□ 0.65
Cd44P15379 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.13■□□□□ 0.65
Cd44P15379 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.13■□□□□ 0.65
Cd44P15379 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Cd44P15379 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd44P15379 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.13■□□□□ 0.65
Cd44P15379 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms