Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srp54P14576 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.9■□□□□ 0.46
Srp54P14576 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srp54P14576 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srp54P14576 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srp54P14576 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.9■□□□□ 0.46
Srp54P14576 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srp54P14576 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Srp54P14576 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Srp54P14576 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Srp54P14576 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Srp54P14576 Gm10252-201ENSMUST00000209541 832 ntBASIC17.89■□□□□ 0.45
Srp54P14576 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Srp54P14576 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.88■□□□□ 0.45
Srp54P14576 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Srp54P14576 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54P14576 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.88■□□□□ 0.45
Srp54P14576 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54P14576 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.88■□□□□ 0.45
Srp54P14576 Gm18666-201ENSMUST00000190039 958 ntBASIC17.88■□□□□ 0.45
Srp54P14576 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.88■□□□□ 0.45
Srp54P14576 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Srp54P14576 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54P14576 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srp54P14576 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.87■□□□□ 0.45
Srp54P14576 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Srp54P14576 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.87■□□□□ 0.45
Srp54P14576 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Srp54P14576 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Srp54P14576 Flg-201ENSMUST00000050758 1488 ntBASIC17.87■□□□□ 0.45
Srp54P14576 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Srp54P14576 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srp54P14576 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.86■□□□□ 0.45
Srp54P14576 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Gm22325-201ENSMUST00000158904 308 ntBASIC17.86■□□□□ 0.45
Srp54P14576 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.86■□□□□ 0.45
Srp54P14576 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Srp54P14576 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.86■□□□□ 0.45
Srp54P14576 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Srp54P14576 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Srp54P14576 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srp54P14576 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.85■□□□□ 0.45
Srp54P14576 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.85■□□□□ 0.45
Srp54P14576 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Srp54P14576 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.85■□□□□ 0.45
Srp54P14576 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.85■□□□□ 0.45
Srp54P14576 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Srp54P14576 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srp54P14576 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Srp54P14576 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srp54P14576 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms