Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Calm3P0DP28 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Calm3P0DP28 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Calm3P0DP28 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.07■□□□□ 0.96
Calm3P0DP28 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.07■□□□□ 0.96
Calm3P0DP28 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.07■□□□□ 0.96
Calm3P0DP28 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.07■□□□□ 0.96
Calm3P0DP28 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.07■□□□□ 0.96
Calm3P0DP28 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Calm3P0DP28 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Calm3P0DP28 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.06■□□□□ 0.96
Calm3P0DP28 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Calm3P0DP28 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Calm3P0DP28 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.06■□□□□ 0.96
Calm3P0DP28 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Calm3P0DP28 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Calm3P0DP28 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 Gm2559-201ENSMUST00000201323 363 ntBASIC21.05■□□□□ 0.96
Calm3P0DP28 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.05■□□□□ 0.96
Calm3P0DP28 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Calm3P0DP28 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.04■□□□□ 0.96
Calm3P0DP28 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Flg-201ENSMUST00000050758 1488 ntBASIC21.04■□□□□ 0.96
Calm3P0DP28 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Calm3P0DP28 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Calm3P0DP28 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calm3P0DP28 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calm3P0DP28 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calm3P0DP28 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.03■□□□□ 0.96
Calm3P0DP28 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calm3P0DP28 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calm3P0DP28 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Calm3P0DP28 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.03■□□□□ 0.96
Calm3P0DP28 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Calm3P0DP28 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Calm3P0DP28 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.01■□□□□ 0.95
Calm3P0DP28 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.01■□□□□ 0.95
Calm3P0DP28 Gm20049-201ENSMUST00000219950 730 ntBASIC21.01■□□□□ 0.95
Calm3P0DP28 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.01■□□□□ 0.95
Calm3P0DP28 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Calm3P0DP28 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Calm3P0DP28 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21■□□□□ 0.95
Calm3P0DP28 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21■□□□□ 0.95
Calm3P0DP28 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21■□□□□ 0.95
Calm3P0DP28 Dio3-201ENSMUST00000097228 1449 ntBASIC21■□□□□ 0.95
Calm3P0DP28 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms