Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim1P0C8K7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.59□□□□□ -0.39
Smim1P0C8K7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim1P0C8K7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smim1P0C8K7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Smim1P0C8K7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Smim1P0C8K7 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.58□□□□□ -0.39
Smim1P0C8K7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.58□□□□□ -0.4
Smim1P0C8K7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smim1P0C8K7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smim1P0C8K7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smim1P0C8K7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.57□□□□□ -0.4
Smim1P0C8K7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Smim1P0C8K7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim1P0C8K7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms