Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hoxc8P09025 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Hoxc8P09025 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.61■□□□□ 0.73
Hoxc8P09025 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc8P09025 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.61■□□□□ 0.73
Hoxc8P09025 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.61■□□□□ 0.73
Hoxc8P09025 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.61■□□□□ 0.73
Hoxc8P09025 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc8P09025 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc8P09025 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.61■□□□□ 0.73
Hoxc8P09025 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc8P09025 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc8P09025 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hoxc8P09025 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc8P09025 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc8P09025 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hoxc8P09025 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.6■□□□□ 0.73
Hoxc8P09025 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.6■□□□□ 0.73
Hoxc8P09025 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc8P09025 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc8P09025 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Hoxc8P09025 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.6■□□□□ 0.73
Hoxc8P09025 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc8P09025 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.6■□□□□ 0.73
Hoxc8P09025 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc8P09025 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.6■□□□□ 0.73
Hoxc8P09025 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc8P09025 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc8P09025 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc8P09025 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc8P09025 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc8P09025 Gm7889-201ENSMUST00000185591 958 ntBASIC19.59■□□□□ 0.73
Hoxc8P09025 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc8P09025 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.59■□□□□ 0.73
Hoxc8P09025 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxc8P09025 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hoxc8P09025 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxc8P09025 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc8P09025 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.59■□□□□ 0.73
Hoxc8P09025 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hoxc8P09025 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc8P09025 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc8P09025 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc8P09025 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Hoxc8P09025 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc8P09025 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc8P09025 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.58■□□□□ 0.72
Hoxc8P09025 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc8P09025 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc8P09025 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.58■□□□□ 0.72
Hoxc8P09025 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.57■□□□□ 0.72
Hoxc8P09025 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hoxc8P09025 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hoxc8P09025 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc8P09025 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc8P09025 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Hoxc8P09025 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc8P09025 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc8P09025 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc8P09025 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc8P09025 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxc8P09025 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.55■□□□□ 0.72
Hoxc8P09025 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 BC021767-201ENSMUST00000126387 1716 ntBASIC19.55■□□□□ 0.72
Hoxc8P09025 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hoxc8P09025 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
Hoxc8P09025 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc8P09025 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.54■□□□□ 0.72
Hoxc8P09025 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Hoxc8P09025 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.54■□□□□ 0.72
Hoxc8P09025 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.54■□□□□ 0.72
Hoxc8P09025 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.54■□□□□ 0.72
Hoxc8P09025 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc8P09025 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Hoxc8P09025 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms