Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sod1P08228 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.27■□□□□ 0.36
Sod1P08228 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sod1P08228 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sod1P08228 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.27■□□□□ 0.36
Sod1P08228 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.27■□□□□ 0.36
Sod1P08228 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sod1P08228 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.27■□□□□ 0.36
Sod1P08228 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sod1P08228 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sod1P08228 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sod1P08228 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sod1P08228 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Sod1P08228 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Sod1P08228 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.26■□□□□ 0.35
Sod1P08228 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sod1P08228 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.26■□□□□ 0.35
Sod1P08228 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.26■□□□□ 0.35
Sod1P08228 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sod1P08228 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.26■□□□□ 0.35
Sod1P08228 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sod1P08228 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.25■□□□□ 0.35
Sod1P08228 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.25■□□□□ 0.35
Sod1P08228 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sod1P08228 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Sod1P08228 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.24■□□□□ 0.35
Sod1P08228 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sod1P08228 Gm7889-201ENSMUST00000185591 958 ntBASIC17.24■□□□□ 0.35
Sod1P08228 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.24■□□□□ 0.35
Sod1P08228 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.24■□□□□ 0.35
Sod1P08228 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sod1P08228 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Sod1P08228 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sod1P08228 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.24■□□□□ 0.35
Sod1P08228 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Sod1P08228 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sod1P08228 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sod1P08228 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.22■□□□□ 0.35
Sod1P08228 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sod1P08228 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sod1P08228 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.21■□□□□ 0.35
Sod1P08228 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.21■□□□□ 0.35
Sod1P08228 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.21■□□□□ 0.35
Sod1P08228 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.21■□□□□ 0.35
Sod1P08228 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.21■□□□□ 0.35
Sod1P08228 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms