Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.16■□□□□ 0.34
Col4a2P08122 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a2P08122 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.16■□□□□ 0.34
Col4a2P08122 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Col4a2P08122 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col4a2P08122 Gm37292-201ENSMUST00000192062 758 ntBASIC17.15■□□□□ 0.34
Col4a2P08122 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col4a2P08122 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.15■□□□□ 0.34
Col4a2P08122 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a2P08122 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a2P08122 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Col4a2P08122 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a2P08122 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a2P08122 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a2P08122 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.14■□□□□ 0.33
Col4a2P08122 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Col4a2P08122 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a2P08122 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a2P08122 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a2P08122 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col4a2P08122 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col4a2P08122 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.14■□□□□ 0.33
Col4a2P08122 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Col4a2P08122 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.13■□□□□ 0.33
Col4a2P08122 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a2P08122 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a2P08122 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col4a2P08122 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a2P08122 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a2P08122 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.13■□□□□ 0.33
Col4a2P08122 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a2P08122 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.13■□□□□ 0.33
Col4a2P08122 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a2P08122 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a2P08122 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a2P08122 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.12■□□□□ 0.33
Col4a2P08122 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col4a2P08122 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a2P08122 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a2P08122 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.12■□□□□ 0.33
Col4a2P08122 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col4a2P08122 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Col4a2P08122 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Iqck-206ENSMUST00000208658 2891 ntBASIC17.11■□□□□ 0.33
Col4a2P08122 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col4a2P08122 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col4a2P08122 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Gm6659-201ENSMUST00000174752 547 ntBASIC17.11■□□□□ 0.33
Col4a2P08122 Gm42545-201ENSMUST00000202755 922 ntBASIC17.11■□□□□ 0.33
Col4a2P08122 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.11■□□□□ 0.33
Col4a2P08122 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col4a2P08122 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col4a2P08122 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.11■□□□□ 0.33
Col4a2P08122 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a2P08122 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.11■□□□□ 0.33
Col4a2P08122 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Col4a2P08122 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col4a2P08122 Gm38285-201ENSMUST00000192928 922 ntBASIC17.1■□□□□ 0.33
Col4a2P08122 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col4a2P08122 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.1■□□□□ 0.33
Col4a2P08122 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col4a2P08122 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a2P08122 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.1■□□□□ 0.33
Col4a2P08122 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.1■□□□□ 0.33
Col4a2P08122 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.1■□□□□ 0.33
Col4a2P08122 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a2P08122 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.1■□□□□ 0.33
Col4a2P08122 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a2P08122 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a2P08122 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms