Protein–RNA interactions for Protein: P06837

Gap43, Neuromodulin, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gap43P06837 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gap43P06837 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gap43P06837 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gap43P06837 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.81■□□□□ 0.6
Gap43P06837 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gap43P06837 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gap43P06837 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gap43P06837 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.8■□□□□ 0.6
Gap43P06837 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.8■□□□□ 0.6
Gap43P06837 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.8■□□□□ 0.6
Gap43P06837 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gap43P06837 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gap43P06837 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gap43P06837 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gap43P06837 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gap43P06837 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gap43P06837 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gap43P06837 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.78■□□□□ 0.6
Gap43P06837 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gap43P06837 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gap43P06837 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gap43P06837 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gap43P06837 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Gap43P06837 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gap43P06837 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.77■□□□□ 0.6
Gap43P06837 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gap43P06837 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.77■□□□□ 0.6
Gap43P06837 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gap43P06837 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gap43P06837 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.77■□□□□ 0.59
Gap43P06837 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gap43P06837 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gap43P06837 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.76■□□□□ 0.59
Gap43P06837 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gap43P06837 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Gap43P06837 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gap43P06837 Gm8969-201ENSMUST00000199694 526 ntBASIC18.75■□□□□ 0.59
Gap43P06837 Gm9959-201ENSMUST00000068277 390 ntBASIC18.75■□□□□ 0.59
Gap43P06837 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gap43P06837 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.75■□□□□ 0.59
Gap43P06837 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Gap43P06837 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gap43P06837 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gap43P06837 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gap43P06837 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gap43P06837 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.74■□□□□ 0.59
Gap43P06837 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
Gap43P06837 Golgb1-201ENSMUST00000023534 498 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms