Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt1P04104 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt1P04104 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Krt1P04104 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.32■□□□□ 0.36
Krt1P04104 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Krt1P04104 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Krt1P04104 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt1P04104 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Krt1P04104 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt1P04104 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Krt1P04104 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Krt1P04104 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Krt1P04104 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Krt1P04104 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.3■□□□□ 0.36
Krt1P04104 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.3■□□□□ 0.36
Krt1P04104 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt1P04104 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Krt1P04104 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Krt1P04104 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Krt1P04104 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Krt1P04104 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Krt1P04104 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.29■□□□□ 0.36
Krt1P04104 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt1P04104 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Krt1P04104 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Krt1P04104 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.28■□□□□ 0.36
Krt1P04104 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Krt1P04104 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.28■□□□□ 0.36
Krt1P04104 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Krt1P04104 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Krt1P04104 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.28■□□□□ 0.36
Krt1P04104 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt1P04104 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.28■□□□□ 0.36
Krt1P04104 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Krt1P04104 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.27■□□□□ 0.36
Krt1P04104 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Krt1P04104 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.27■□□□□ 0.36
Krt1P04104 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Krt1P04104 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt1P04104 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt1P04104 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Krt1P04104 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt1P04104 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt1P04104 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Krt1P04104 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms