Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Dio3-201ENSMUST00000097228 1449 ntBASIC19.68■□□□□ 0.74
Vti1aO89116 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vti1aO89116 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Gm44549-201ENSMUST00000208351 577 ntBASIC19.68■□□□□ 0.74
Vti1aO89116 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.68■□□□□ 0.74
Vti1aO89116 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.68■□□□□ 0.74
Vti1aO89116 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vti1aO89116 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.67■□□□□ 0.74
Vti1aO89116 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vti1aO89116 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Vti1aO89116 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vti1aO89116 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vti1aO89116 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.66■□□□□ 0.74
Vti1aO89116 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.66■□□□□ 0.74
Vti1aO89116 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Vti1aO89116 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vti1aO89116 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.66■□□□□ 0.74
Vti1aO89116 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.65■□□□□ 0.74
Vti1aO89116 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Gm22325-201ENSMUST00000158904 308 ntBASIC19.65■□□□□ 0.74
Vti1aO89116 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.65■□□□□ 0.74
Vti1aO89116 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vti1aO89116 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vti1aO89116 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vti1aO89116 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Vti1aO89116 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Vti1aO89116 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1aO89116 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1aO89116 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1aO89116 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.64■□□□□ 0.73
Vti1aO89116 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.64■□□□□ 0.73
Vti1aO89116 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1aO89116 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1aO89116 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Vti1aO89116 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vti1aO89116 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Vti1aO89116 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.63■□□□□ 0.73
Vti1aO89116 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.63■□□□□ 0.73
Vti1aO89116 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Vti1aO89116 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.63■□□□□ 0.73
Vti1aO89116 Gm18666-201ENSMUST00000190039 958 ntBASIC19.63■□□□□ 0.73
Vti1aO89116 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vti1aO89116 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms