Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hdac3O88895 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Hdac3O88895 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.31■□□□□ 0.2
Hdac3O88895 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hdac3O88895 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.3■□□□□ 0.2
Hdac3O88895 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.3■□□□□ 0.2
Hdac3O88895 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Hdac3O88895 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hdac3O88895 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Gm38205-201ENSMUST00000192243 258 ntBASIC16.3■□□□□ 0.2
Hdac3O88895 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.3■□□□□ 0.2
Hdac3O88895 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.3■□□□□ 0.2
Hdac3O88895 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.3■□□□□ 0.2
Hdac3O88895 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.3■□□□□ 0.2
Hdac3O88895 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.3■□□□□ 0.2
Hdac3O88895 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hdac3O88895 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Hdac3O88895 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Hdac3O88895 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hdac3O88895 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hdac3O88895 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hdac3O88895 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.29■□□□□ 0.2
Hdac3O88895 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hdac3O88895 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hdac3O88895 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Hdac3O88895 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Hdac3O88895 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.28■□□□□ 0.2
Hdac3O88895 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hdac3O88895 Gm18284-201ENSMUST00000172604 624 ntBASIC16.28■□□□□ 0.2
Hdac3O88895 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hdac3O88895 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.28■□□□□ 0.2
Hdac3O88895 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Hdac3O88895 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hdac3O88895 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hdac3O88895 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hdac3O88895 Reep4-203ENSMUST00000226563 1444 ntBASIC16.28■□□□□ 0.2
Hdac3O88895 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hdac3O88895 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hdac3O88895 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hdac3O88895 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hdac3O88895 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hdac3O88895 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Hdac3O88895 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Hdac3O88895 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Hdac3O88895 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hdac3O88895 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hdac3O88895 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hdac3O88895 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hdac3O88895 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hdac3O88895 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Hdac3O88895 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Hdac3O88895 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hdac3O88895 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hdac3O88895 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hdac3O88895 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Hdac3O88895 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Gm13534-201ENSMUST00000121169 513 ntBASIC16.26■□□□□ 0.19
Hdac3O88895 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hdac3O88895 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.26■□□□□ 0.19
Hdac3O88895 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms