Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.8■■□□□ 1.4
Apaf1O88879 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Apaf1O88879 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Apaf1O88879 Mtag2-201ENSMUST00000058665 714 ntBASIC23.8■■□□□ 1.4
Apaf1O88879 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Apaf1O88879 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Apaf1O88879 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Apaf1O88879 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Apaf1O88879 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Apaf1O88879 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Apaf1O88879 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apaf1O88879 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.79■■□□□ 1.4
Apaf1O88879 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apaf1O88879 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apaf1O88879 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apaf1O88879 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apaf1O88879 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apaf1O88879 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.78■■□□□ 1.4
Apaf1O88879 Gm13168-201ENSMUST00000121771 632 ntBASIC23.78■■□□□ 1.4
Apaf1O88879 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.78■■□□□ 1.4
Apaf1O88879 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Apaf1O88879 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Apaf1O88879 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.77■■□□□ 1.4
Apaf1O88879 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.77■■□□□ 1.4
Apaf1O88879 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Apaf1O88879 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apaf1O88879 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Apaf1O88879 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Flg-201ENSMUST00000050758 1488 ntBASIC23.76■■□□□ 1.39
Apaf1O88879 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Zfp783-201ENSMUST00000095946 670 ntBASIC23.76■■□□□ 1.39
Apaf1O88879 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.76■■□□□ 1.39
Apaf1O88879 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.76■■□□□ 1.39
Apaf1O88879 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Apaf1O88879 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.75■■□□□ 1.39
Apaf1O88879 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.75■■□□□ 1.39
Apaf1O88879 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC23.75■■□□□ 1.39
Apaf1O88879 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.75■■□□□ 1.39
Apaf1O88879 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apaf1O88879 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.74■■□□□ 1.39
Apaf1O88879 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
Apaf1O88879 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Apaf1O88879 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apaf1O88879 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apaf1O88879 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Apaf1O88879 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apaf1O88879 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Apaf1O88879 Gm5643-201ENSMUST00000117081 966 ntBASIC23.73■■□□□ 1.39
Apaf1O88879 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apaf1O88879 Gm22240-201ENSMUST00000175225 82 ntBASIC23.73■■□□□ 1.39
Apaf1O88879 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Apaf1O88879 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apaf1O88879 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.73■■□□□ 1.39
Apaf1O88879 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Apaf1O88879 Gm8520-201ENSMUST00000186517 868 ntBASIC23.72■■□□□ 1.39
Apaf1O88879 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Apaf1O88879 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Apaf1O88879 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Apaf1O88879 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Apaf1O88879 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Apaf1O88879 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms