Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Hcn3O88705 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hcn3O88705 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Hcn3O88705 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Hcn3O88705 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Hcn3O88705 Gm8493-201ENSMUST00000196881 489 ntBASIC17.47■□□□□ 0.39
Hcn3O88705 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.47■□□□□ 0.39
Hcn3O88705 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.47■□□□□ 0.39
Hcn3O88705 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn3O88705 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.47■□□□□ 0.39
Hcn3O88705 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.46■□□□□ 0.39
Hcn3O88705 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.46■□□□□ 0.39
Hcn3O88705 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.46■□□□□ 0.39
Hcn3O88705 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.46■□□□□ 0.39
Hcn3O88705 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Gm6139-201ENSMUST00000079261 882 ntBASIC17.46■□□□□ 0.39
Hcn3O88705 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn3O88705 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hcn3O88705 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hcn3O88705 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Hcn3O88705 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Hcn3O88705 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Hcn3O88705 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hcn3O88705 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.45■□□□□ 0.38
Hcn3O88705 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn3O88705 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.45■□□□□ 0.38
Hcn3O88705 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.44■□□□□ 0.38
Hcn3O88705 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.44■□□□□ 0.38
Hcn3O88705 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.44■□□□□ 0.38
Hcn3O88705 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.44■□□□□ 0.38
Hcn3O88705 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.44■□□□□ 0.38
Hcn3O88705 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn3O88705 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hcn3O88705 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hcn3O88705 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hcn3O88705 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.43■□□□□ 0.38
Hcn3O88705 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn3O88705 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.43■□□□□ 0.38
Hcn3O88705 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.42■□□□□ 0.38
Hcn3O88705 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Hcn3O88705 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms