Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Tgfbr3O88393 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.38■□□□□ 0.37
Tgfbr3O88393 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Golph3-202ENSMUST00000226517 2359 ntBASIC17.38■□□□□ 0.37
Tgfbr3O88393 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Tgfbr3O88393 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr3O88393 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.36■□□□□ 0.37
Tgfbr3O88393 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.36■□□□□ 0.37
Tgfbr3O88393 Gm11539-201ENSMUST00000119837 557 ntBASIC17.36■□□□□ 0.37
Tgfbr3O88393 Gm13436-201ENSMUST00000120418 567 ntBASIC17.36■□□□□ 0.37
Tgfbr3O88393 Gm13559-201ENSMUST00000120476 863 ntBASIC17.36■□□□□ 0.37
Tgfbr3O88393 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tgfbr3O88393 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.36■□□□□ 0.37
Tgfbr3O88393 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.36■□□□□ 0.37
Tgfbr3O88393 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Odf3b-204ENSMUST00000227834 930 ntBASIC17.35■□□□□ 0.37
Tgfbr3O88393 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr3O88393 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Gm12382-201ENSMUST00000122005 922 ntBASIC17.34■□□□□ 0.37
Tgfbr3O88393 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.34■□□□□ 0.37
Tgfbr3O88393 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Timm23-208ENSMUST00000226683 750 ntBASIC17.34■□□□□ 0.37
Tgfbr3O88393 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.34■□□□□ 0.37
Tgfbr3O88393 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr3O88393 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.33■□□□□ 0.37
Tgfbr3O88393 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr3O88393 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfbr3O88393 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.33■□□□□ 0.36
Tgfbr3O88393 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfbr3O88393 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms