Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.81■□□□□ 0.44
Tspan6O70401 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tspan6O70401 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tspan6O70401 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tspan6O70401 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tspan6O70401 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Tspan6O70401 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.8■□□□□ 0.44
Tspan6O70401 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Tspan6O70401 Gm13836-201ENSMUST00000121159 501 ntBASIC17.8■□□□□ 0.44
Tspan6O70401 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tspan6O70401 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tspan6O70401 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.8■□□□□ 0.44
Tspan6O70401 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tspan6O70401 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tspan6O70401 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tspan6O70401 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.79■□□□□ 0.44
Tspan6O70401 Mir5122-201ENSMUST00000175004 89 ntBASIC17.79■□□□□ 0.44
Tspan6O70401 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.79■□□□□ 0.44
Tspan6O70401 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Gm18025-201ENSMUST00000221733 862 ntBASIC17.79■□□□□ 0.44
Tspan6O70401 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.79■□□□□ 0.44
Tspan6O70401 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.79■□□□□ 0.44
Tspan6O70401 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Tspan6O70401 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tspan6O70401 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.79■□□□□ 0.44
Tspan6O70401 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.79■□□□□ 0.44
Tspan6O70401 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Tspan6O70401 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.78■□□□□ 0.44
Tspan6O70401 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tspan6O70401 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.78■□□□□ 0.44
Tspan6O70401 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.78■□□□□ 0.44
Tspan6O70401 Mir6349-201ENSMUST00000184059 97 ntBASIC17.78■□□□□ 0.44
Tspan6O70401 Gm43183-201ENSMUST00000200632 547 ntBASIC17.78■□□□□ 0.44
Tspan6O70401 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tspan6O70401 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tspan6O70401 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tspan6O70401 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tspan6O70401 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tspan6O70401 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tspan6O70401 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tspan6O70401 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tspan6O70401 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tspan6O70401 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tspan6O70401 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.76■□□□□ 0.43
Tspan6O70401 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tspan6O70401 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.76■□□□□ 0.43
Tspan6O70401 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.76■□□□□ 0.43
Tspan6O70401 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.76■□□□□ 0.43
Tspan6O70401 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tspan6O70401 Gm15565-201ENSMUST00000118890 427 ntBASIC17.76■□□□□ 0.43
Tspan6O70401 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tspan6O70401 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tspan6O70401 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tspan6O70401 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tspan6O70401 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tspan6O70401 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tspan6O70401 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tspan6O70401 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Tspan6O70401 Gm7977-201ENSMUST00000193787 748 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms