Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SncaO55042 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.13■□□□□ 0.01
SncaO55042 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SncaO55042 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.13■□□□□ 0.01
SncaO55042 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SncaO55042 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SncaO55042 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.12■□□□□ 0.01
SncaO55042 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SncaO55042 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SncaO55042 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
SncaO55042 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.11■□□□□ 0.01
SncaO55042 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SncaO55042 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SncaO55042 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Gm27454-201ENSMUST00000185090 204 ntBASIC15.11■□□□□ 0.01
SncaO55042 Gm40848-201ENSMUST00000221998 324 ntBASIC15.11■□□□□ 0.01
SncaO55042 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.11■□□□□ 0.01
SncaO55042 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SncaO55042 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
SncaO55042 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SncaO55042 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.1■□□□□ 0.01
SncaO55042 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SncaO55042 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.1■□□□□ 0.01
SncaO55042 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.1■□□□□ 0.01
SncaO55042 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SncaO55042 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SncaO55042 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SncaO55042 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SncaO55042 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.09■□□□□ 0.01
SncaO55042 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.09■□□□□ 0.01
SncaO55042 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SncaO55042 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SncaO55042 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.08■□□□□ 0.01
SncaO55042 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SncaO55042 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SncaO55042 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SncaO55042 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
SncaO55042 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SncaO55042 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.08■□□□□ 0
SncaO55042 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SncaO55042 Gm6139-201ENSMUST00000079261 882 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms