Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1bO55017 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1bO55017 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1bO55017 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cacna1bO55017 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 AA414768-201ENSMUST00000121924 1257 ntBASIC17.61■□□□□ 0.41
Cacna1bO55017 Gm12382-201ENSMUST00000122005 922 ntBASIC17.61■□□□□ 0.41
Cacna1bO55017 Gm37292-201ENSMUST00000192062 758 ntBASIC17.61■□□□□ 0.41
Cacna1bO55017 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cacna1bO55017 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cacna1bO55017 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1bO55017 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cacna1bO55017 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
Cacna1bO55017 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1bO55017 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1bO55017 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.6■□□□□ 0.41
Cacna1bO55017 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1bO55017 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.6■□□□□ 0.41
Cacna1bO55017 Gm18959-201ENSMUST00000208954 655 ntBASIC17.6■□□□□ 0.41
Cacna1bO55017 Gm18101-201ENSMUST00000215769 548 ntBASIC17.6■□□□□ 0.41
Cacna1bO55017 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Cacna1bO55017 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cacna1bO55017 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1bO55017 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.6■□□□□ 0.41
Cacna1bO55017 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1bO55017 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1bO55017 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.59■□□□□ 0.41
Cacna1bO55017 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cacna1bO55017 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1bO55017 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1bO55017 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Cacna1bO55017 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Cacna1bO55017 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1bO55017 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.58■□□□□ 0.41
Cacna1bO55017 Gm17971-201ENSMUST00000190239 806 ntBASIC17.58■□□□□ 0.41
Cacna1bO55017 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cacna1bO55017 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1bO55017 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cacna1bO55017 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1bO55017 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1bO55017 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1bO55017 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.57■□□□□ 0.4
Cacna1bO55017 Mir6349-201ENSMUST00000184059 97 ntBASIC17.57■□□□□ 0.4
Cacna1bO55017 Gm33142-201ENSMUST00000193913 867 ntBASIC17.57■□□□□ 0.4
Cacna1bO55017 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.57■□□□□ 0.4
Cacna1bO55017 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cacna1bO55017 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1bO55017 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.57■□□□□ 0.4
Cacna1bO55017 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacna1bO55017 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1bO55017 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1bO55017 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1bO55017 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cacna1bO55017 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cacna1bO55017 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cacna1bO55017 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Cacna1bO55017 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1bO55017 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1bO55017 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1bO55017 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1bO55017 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacna1bO55017 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacna1bO55017 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms