Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx8O35652 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx8O35652 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lhx8O35652 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lhx8O35652 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.63■□□□□ 0.41
Lhx8O35652 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.63■□□□□ 0.41
Lhx8O35652 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.63■□□□□ 0.41
Lhx8O35652 Gm17872-201ENSMUST00000222550 532 ntBASIC17.63■□□□□ 0.41
Lhx8O35652 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx8O35652 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 AC102523.2-201ENSMUST00000227813 983 ntBASIC17.62■□□□□ 0.41
Lhx8O35652 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.62■□□□□ 0.41
Lhx8O35652 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lhx8O35652 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx8O35652 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.62■□□□□ 0.41
Lhx8O35652 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.61■□□□□ 0.41
Lhx8O35652 Gm13263-201ENSMUST00000121271 838 ntBASIC17.61■□□□□ 0.41
Lhx8O35652 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Lhx8O35652 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.61■□□□□ 0.41
Lhx8O35652 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lhx8O35652 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lhx8O35652 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx8O35652 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Gm7860-201ENSMUST00000121190 879 ntBASIC17.6■□□□□ 0.41
Lhx8O35652 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx8O35652 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx8O35652 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx8O35652 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx8O35652 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx8O35652 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx8O35652 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx8O35652 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx8O35652 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Lhx8O35652 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lhx8O35652 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lhx8O35652 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.58■□□□□ 0.4
Lhx8O35652 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.58■□□□□ 0.4
Lhx8O35652 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.4
Lhx8O35652 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx8O35652 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms