Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.64■□□□□ 0.73
Nr1i3O35627 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1i3O35627 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1i3O35627 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.63■□□□□ 0.73
Nr1i3O35627 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1i3O35627 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1i3O35627 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1i3O35627 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1i3O35627 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1i3O35627 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1i3O35627 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Nr1i3O35627 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.62■□□□□ 0.73
Nr1i3O35627 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1i3O35627 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.61■□□□□ 0.73
Nr1i3O35627 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.61■□□□□ 0.73
Nr1i3O35627 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.61■□□□□ 0.73
Nr1i3O35627 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.61■□□□□ 0.73
Nr1i3O35627 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nr1i3O35627 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1i3O35627 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.61■□□□□ 0.73
Nr1i3O35627 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.6■□□□□ 0.73
Nr1i3O35627 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.6■□□□□ 0.73
Nr1i3O35627 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.6■□□□□ 0.73
Nr1i3O35627 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nr1i3O35627 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nr1i3O35627 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1i3O35627 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Gm6420-201ENSMUST00000193885 723 ntBASIC19.59■□□□□ 0.73
Nr1i3O35627 Gm8969-201ENSMUST00000199694 526 ntBASIC19.59■□□□□ 0.73
Nr1i3O35627 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Nr1i3O35627 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nr1i3O35627 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1i3O35627 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1i3O35627 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1i3O35627 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1i3O35627 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1i3O35627 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1i3O35627 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.58■□□□□ 0.72
Nr1i3O35627 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.58■□□□□ 0.72
Nr1i3O35627 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1i3O35627 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1i3O35627 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1i3O35627 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.58■□□□□ 0.72
Nr1i3O35627 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1i3O35627 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.57■□□□□ 0.72
Nr1i3O35627 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1i3O35627 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1i3O35627 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nr1i3O35627 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1i3O35627 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1i3O35627 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1i3O35627 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.57■□□□□ 0.72
Nr1i3O35627 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.57■□□□□ 0.72
Nr1i3O35627 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nr1i3O35627 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nr1i3O35627 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nr1i3O35627 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1i3O35627 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nr1i3O35627 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1i3O35627 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1i3O35627 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1i3O35627 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Nr1i3O35627 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Nr1i3O35627 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Nr1i3O35627 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1i3O35627 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms