Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Slc1a6O35544 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Slc1a6O35544 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Slc1a6O35544 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Slc1a6O35544 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Tgds-204ENSMUST00000228543 1594 ntBASIC17.99■□□□□ 0.47
Slc1a6O35544 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a6O35544 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.98■□□□□ 0.47
Slc1a6O35544 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc1a6O35544 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.98■□□□□ 0.47
Slc1a6O35544 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Slc1a6O35544 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.98■□□□□ 0.47
Slc1a6O35544 Gm38205-201ENSMUST00000192243 258 ntBASIC17.98■□□□□ 0.47
Slc1a6O35544 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.98■□□□□ 0.47
Slc1a6O35544 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc1a6O35544 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.98■□□□□ 0.47
Slc1a6O35544 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a6O35544 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.97■□□□□ 0.47
Slc1a6O35544 Gm8493-201ENSMUST00000196881 489 ntBASIC17.97■□□□□ 0.47
Slc1a6O35544 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a6O35544 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slc1a6O35544 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slc1a6O35544 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.96■□□□□ 0.47
Slc1a6O35544 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Slc1a6O35544 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Slc1a6O35544 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.96■□□□□ 0.47
Slc1a6O35544 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a6O35544 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slc1a6O35544 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Slc1a6O35544 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Slc1a6O35544 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc1a6O35544 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc1a6O35544 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc1a6O35544 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.95■□□□□ 0.46
Slc1a6O35544 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.95■□□□□ 0.46
Slc1a6O35544 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a6O35544 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Slc1a6O35544 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.94■□□□□ 0.46
Slc1a6O35544 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Slc1a6O35544 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms