Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Stx1aO35526 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Stx1aO35526 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Stx1aO35526 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Stx1aO35526 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Stx1aO35526 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Stx1aO35526 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Stx1aO35526 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Stx1aO35526 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.53■□□□□ 0.88
Stx1aO35526 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Stx1aO35526 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.53■□□□□ 0.88
Stx1aO35526 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stx1aO35526 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.53■□□□□ 0.88
Stx1aO35526 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.52■□□□□ 0.88
Stx1aO35526 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stx1aO35526 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Stx1aO35526 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.52■□□□□ 0.88
Stx1aO35526 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.52■□□□□ 0.88
Stx1aO35526 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stx1aO35526 Gm13241-201ENSMUST00000094493 780 ntBASIC20.52■□□□□ 0.88
Stx1aO35526 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stx1aO35526 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Stx1aO35526 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Stx1aO35526 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stx1aO35526 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.51■□□□□ 0.87
Stx1aO35526 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.51■□□□□ 0.87
Stx1aO35526 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stx1aO35526 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stx1aO35526 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stx1aO35526 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stx1aO35526 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stx1aO35526 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.5■□□□□ 0.87
Stx1aO35526 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.5■□□□□ 0.87
Stx1aO35526 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.5■□□□□ 0.87
Stx1aO35526 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.5■□□□□ 0.87
Stx1aO35526 Gm40848-201ENSMUST00000221998 324 ntBASIC20.5■□□□□ 0.87
Stx1aO35526 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Stx1aO35526 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Tgds-204ENSMUST00000228543 1594 ntBASIC20.5■□□□□ 0.87
Stx1aO35526 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.5■□□□□ 0.87
Stx1aO35526 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stx1aO35526 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Stx1aO35526 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.49■□□□□ 0.87
Stx1aO35526 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.49■□□□□ 0.87
Stx1aO35526 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.49■□□□□ 0.87
Stx1aO35526 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.49■□□□□ 0.87
Stx1aO35526 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Stx1aO35526 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Stx1aO35526 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.48■□□□□ 0.87
Stx1aO35526 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.48■□□□□ 0.87
Stx1aO35526 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stx1aO35526 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.48■□□□□ 0.87
Stx1aO35526 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms