Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clcn6O35454 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn6O35454 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Clcn6O35454 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.27■□□□□ 0.67
Clcn6O35454 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clcn6O35454 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.26■□□□□ 0.67
Clcn6O35454 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Clcn6O35454 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.26■□□□□ 0.67
Clcn6O35454 Gm37073-201ENSMUST00000192469 1222 ntBASIC19.26■□□□□ 0.67
Clcn6O35454 Gm42474-201ENSMUST00000201073 505 ntBASIC19.26■□□□□ 0.67
Clcn6O35454 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clcn6O35454 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clcn6O35454 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn6O35454 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.26■□□□□ 0.67
Clcn6O35454 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Clcn6O35454 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clcn6O35454 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Clcn6O35454 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn6O35454 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clcn6O35454 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC19.24■□□□□ 0.67
Clcn6O35454 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.24■□□□□ 0.67
Clcn6O35454 AC153937.1-201ENSMUST00000218734 412 ntBASIC19.24■□□□□ 0.67
Clcn6O35454 AC173345.3-201ENSMUST00000221245 1093 ntBASIC19.24■□□□□ 0.67
Clcn6O35454 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn6O35454 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clcn6O35454 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clcn6O35454 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clcn6O35454 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Gm11421-201ENSMUST00000122124 294 ntBASIC19.23■□□□□ 0.67
Clcn6O35454 Gm25653-201ENSMUST00000158473 138 ntBASIC19.23■□□□□ 0.67
Clcn6O35454 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Gm40848-201ENSMUST00000221998 324 ntBASIC19.23■□□□□ 0.67
Clcn6O35454 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clcn6O35454 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn6O35454 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Clcn6O35454 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.22■□□□□ 0.67
Clcn6O35454 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms