Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Trmt13-210ENSMUST00000198454 880 ntBASIC16.86■□□□□ 0.29
Capn1O35350 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Capn1O35350 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.86■□□□□ 0.29
Capn1O35350 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Capn1O35350 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Capn1O35350 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capn1O35350 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.85■□□□□ 0.29
Capn1O35350 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.85■□□□□ 0.29
Capn1O35350 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.85■□□□□ 0.29
Capn1O35350 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capn1O35350 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capn1O35350 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.85■□□□□ 0.29
Capn1O35350 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
Capn1O35350 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Capn1O35350 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Capn1O35350 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Capn1O35350 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Capn1O35350 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Capn1O35350 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Capn1O35350 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Capn1O35350 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Capn1O35350 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Capn1O35350 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.83■□□□□ 0.28
Capn1O35350 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Capn1O35350 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Capn1O35350 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Capn1O35350 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Capn1O35350 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.83■□□□□ 0.28
Capn1O35350 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.82■□□□□ 0.28
Capn1O35350 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Capn1O35350 Gm10252-201ENSMUST00000209541 832 ntBASIC16.82■□□□□ 0.28
Capn1O35350 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Capn1O35350 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Capn1O35350 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Capn1O35350 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Capn1O35350 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
Capn1O35350 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.81■□□□□ 0.28
Capn1O35350 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.81■□□□□ 0.28
Capn1O35350 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.81■□□□□ 0.28
Capn1O35350 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.81■□□□□ 0.28
Capn1O35350 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.81■□□□□ 0.28
Capn1O35350 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Capn1O35350 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms