Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.25□□□□□ -0.13
Tnfsf11O35235 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.25□□□□□ -0.13
Tnfsf11O35235 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.25□□□□□ -0.13
Tnfsf11O35235 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfsf11O35235 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf11O35235 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfsf11O35235 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf11O35235 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.23□□□□□ -0.13
Tnfsf11O35235 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf11O35235 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Gm45102-201ENSMUST00000207427 857 ntBASIC14.22□□□□□ -0.13
Tnfsf11O35235 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tnfsf11O35235 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfsf11O35235 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.22□□□□□ -0.13
Tnfsf11O35235 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.21□□□□□ -0.13
Tnfsf11O35235 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Rps24-207ENSMUST00000224568 714 ntBASIC14.21□□□□□ -0.13
Tnfsf11O35235 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfsf11O35235 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms