Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.91■□□□□ 0.3
Hps1O08983 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.91■□□□□ 0.3
Hps1O08983 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Hps1O08983 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Hps1O08983 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.9■□□□□ 0.3
Hps1O08983 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.9■□□□□ 0.3
Hps1O08983 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hps1O08983 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hps1O08983 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hps1O08983 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.89■□□□□ 0.29
Hps1O08983 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hps1O08983 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hps1O08983 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hps1O08983 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.88■□□□□ 0.29
Hps1O08983 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hps1O08983 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.88■□□□□ 0.29
Hps1O08983 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hps1O08983 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.88■□□□□ 0.29
Hps1O08983 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hps1O08983 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.88■□□□□ 0.29
Hps1O08983 Smad6-203ENSMUST00000179458 273 ntBASIC16.88■□□□□ 0.29
Hps1O08983 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Hps1O08983 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.88■□□□□ 0.29
Hps1O08983 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hps1O08983 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.87■□□□□ 0.29
Hps1O08983 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hps1O08983 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hps1O08983 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.87■□□□□ 0.29
Hps1O08983 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hps1O08983 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Hps1O08983 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hps1O08983 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.86■□□□□ 0.29
Hps1O08983 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Gm10033-202ENSMUST00000211874 928 ntBASIC16.86■□□□□ 0.29
Hps1O08983 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.86■□□□□ 0.29
Hps1O08983 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hps1O08983 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms