Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Gm10252-201ENSMUST00000209541 832 ntBASIC19.53■□□□□ 0.72
Usp35M0QWN7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.53■□□□□ 0.72
Usp35M0QWN7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp35M0QWN7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.52■□□□□ 0.72
Usp35M0QWN7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.52■□□□□ 0.72
Usp35M0QWN7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp35M0QWN7 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.52■□□□□ 0.71
Usp35M0QWN7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Usp35M0QWN7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp35M0QWN7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.51■□□□□ 0.71
Usp35M0QWN7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp35M0QWN7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Gm10812-201ENSMUST00000099864 546 ntBASIC19.5■□□□□ 0.71
Usp35M0QWN7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp35M0QWN7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.49■□□□□ 0.71
Usp35M0QWN7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp35M0QWN7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms