Protein–RNA interactions for Protein: L7N2C0

Gm6401, Predicted gene 6401 (Fragment), mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6401L7N2C0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm6401L7N2C0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm6401L7N2C0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm6401L7N2C0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm6401L7N2C0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm6401L7N2C0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Gm6401L7N2C0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm6401L7N2C0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm6401L7N2C0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm6401L7N2C0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.24■□□□□ 0.19
Gm6401L7N2C0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm6401L7N2C0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm6401L7N2C0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Gm22238-201ENSMUST00000175222 88 ntBASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm6401L7N2C0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Gm9959-201ENSMUST00000068277 390 ntBASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm6401L7N2C0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm6401L7N2C0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm6401L7N2C0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.2■□□□□ 0.18
Gm6401L7N2C0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm6401L7N2C0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms