Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Gm10819-201ENSMUST00000099988 561 ntBASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004C17RikJ3QP07 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
B020004C17RikJ3QP07 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
B020004C17RikJ3QP07 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Gm45058-201ENSMUST00000205810 766 ntBASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Gm18032-201ENSMUST00000222541 538 ntBASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Gm7367-201ENSMUST00000057611 492 ntBASIC20.51■□□□□ 0.87
B020004C17RikJ3QP07 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004C17RikJ3QP07 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Gm10013-201ENSMUST00000106074 672 ntBASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Gm23634-201ENSMUST00000175071 91 ntBASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
B020004C17RikJ3QP07 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004C17RikJ3QP07 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004C17RikJ3QP07 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Gm10517-202ENSMUST00000192970 758 ntBASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004C17RikJ3QP07 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
B020004C17RikJ3QP07 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
B020004C17RikJ3QP07 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Gm38027-201ENSMUST00000192315 235 ntBASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004C17RikJ3QP07 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms